Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.47□□□□□ -1.85
PKNOX1P55347 AC008173.1-201ENST00000418901 264 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 RPL17P36-201ENST00000420302 549 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.47□□□□□ -1.85
PKNOX1P55347 RPL31P12-201ENST00000422587 358 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 RSL24D1P6-201ENST00000426934 401 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.47□□□□□ -1.85
PKNOX1P55347 BX679664.1-201ENST00000434429 253 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 YWHAZP8-201ENST00000436935 731 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.47□□□□□ -1.85
PKNOX1P55347 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.47□□□□□ -1.85
PKNOX1P55347 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.47□□□□□ -1.85
PKNOX1P55347 TPT1P12-201ENST00000448968 492 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.47□□□□□ -1.85
PKNOX1P55347 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.47□□□□□ -1.85
PKNOX1P55347 HMGB3P30-201ENST00000457863 606 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 snoU13.7-201ENST00000459220 104 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC010468.1-201ENST00000461022 817 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 RN7SL594P-201ENST00000470590 287 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 SETP14-201ENST00000497538 873 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC121161.1-201ENST00000510606 652 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 HIGD1AP10-201ENST00000527837 282 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.47□□□□□ -1.85
PKNOX1P55347 AC026333.2-201ENST00000542164 106 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 AC092474.3-201ENST00000603022 568 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC006254.3-201ENST00000603353 884 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.47□□□□□ -1.85
PKNOX1P55347 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.47□□□□□ -1.85
PKNOX1P55347 AC132825.7-201ENST00000638744 335 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 FAM157B-203ENST00000639350 358 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 AC046144.1-201ENST00000478559 1853 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 AC026951.1-201ENST00000559530 2459 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKNOX1P55347 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
PKNOX1P55347 MFSD8-233ENST00000641482 4860 ntBASIC3.47□□□□□ -1.85
PKNOX1P55347 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX1P55347 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX1P55347 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC016716.1-201ENST00000265882 708 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 Y_RNA.110-201ENST00000363220 99 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 SNORA70.2-201ENST00000364506 135 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX1P55347 RPL7P60-201ENST00000397636 735 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX1P55347 MTCO3P31-201ENST00000405526 789 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.46□□□□□ -1.86
PKNOX1P55347 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX1P55347 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.46□□□□□ -1.86
PKNOX1P55347 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX1P55347 HMGB1P45-201ENST00000435986 653 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AL138799.3-201ENST00000438968 350 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AL357552.1-201ENST00000445254 415 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.46□□□□□ -1.86
PKNOX1P55347 RPS3AP46-201ENST00000448352 682 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 RPS4XP2-201ENST00000458402 793 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 SETP6-201ENST00000479329 568 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AC093267.1-201ENST00000489176 961 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC078817.1-201ENST00000492623 435 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AC020893.1-201ENST00000502452 580 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.46□□□□□ -1.86
PKNOX1P55347 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC008628.1-201ENST00000508663 265 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.46□□□□□ -1.86
PKNOX1P55347 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.46□□□□□ -1.86
PKNOX1P55347 PTGES3P3-201ENST00000511479 482 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AC026402.1-201ENST00000513642 170 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.46□□□□□ -1.86
PKNOX1P55347 OR8L1P-201ENST00000534005 955 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX1P55347 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.46□□□□□ -1.86
PKNOX1P55347 RN7SL703P-201ENST00000578485 302 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AC006270.2-201ENST00000578523 652 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 RN7SL622P-201ENST00000585292 275 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC008687.2-201ENST00000597865 520 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX1P55347 AC069209.1-201ENST00000619282 651 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.46□□□□□ -1.86
PKNOX1P55347 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
PKNOX1P55347 MIR4496-201ENST00000635896 61 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 AC138649.5-201ENST00000637456 137 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PKNOX1P55347 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX1P55347 GABPAP-201ENST00000419271 1356 ntBASIC3.46□□□□□ -1.86
PKNOX1P55347 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKNOX1P55347 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PKNOX1P55347 MTCO1P4-201ENST00000520516 1409 ntBASIC3.45□□□□□ -1.86
PKNOX1P55347 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms