Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 CYP2C60P-201ENST00000566088 139 ntBASIC4.4□□□□□ -1.7
MSH6P52701 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.4□□□□□ -1.7
MSH6P52701 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.4□□□□□ -1.7
MSH6P52701 AC138473.1-201ENST00000605717 526 ntBASIC4.4□□□□□ -1.7
MSH6P52701 AL162574.2-201ENST00000614618 657 ntBASIC4.4□□□□□ -1.7
MSH6P52701 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.4□□□□□ -1.7
MSH6P52701 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.4□□□□□ -1.7
MSH6P52701 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MSH6P52701 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
MSH6P52701 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MSH6P52701 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.4□□□□□ -1.71
MSH6P52701 AC107027.3-201ENST00000565095 3473 ntBASIC4.4□□□□□ -1.71
MSH6P52701 AMD1P2-201ENST00000412936 992 ntBASIC4.4□□□□□ -1.71
MSH6P52701 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.4□□□□□ -1.71
MSH6P52701 RPS24P13-201ENST00000442520 397 ntBASIC4.4□□□□□ -1.71
MSH6P52701 RPL7P36-201ENST00000444633 681 ntBASIC4.4□□□□□ -1.71
MSH6P52701 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.4□□□□□ -1.71
MSH6P52701 RPL23AP67-201ENST00000465341 474 ntBASIC4.4□□□□□ -1.71
MSH6P52701 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.4□□□□□ -1.71
MSH6P52701 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.4□□□□□ -1.71
MSH6P52701 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.4□□□□□ -1.71
MSH6P52701 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.4□□□□□ -1.71
MSH6P52701 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.4□□□□□ -1.71
MSH6P52701 COX6CP8-201ENST00000522620 226 ntBASIC4.4□□□□□ -1.71
MSH6P52701 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.4□□□□□ -1.71
MSH6P52701 MIR4738-201ENST00000579134 87 ntBASIC4.4□□□□□ -1.71
MSH6P52701 uc_338.25-201ENST00000613756 156 ntBASIC4.4□□□□□ -1.71
MSH6P52701 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
MSH6P52701 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.39□□□□□ -1.71
MSH6P52701 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.39□□□□□ -1.71
MSH6P52701 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.39□□□□□ -1.71
MSH6P52701 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MSH6P52701 MIR423-201ENST00000362201 94 ntBASIC4.39□□□□□ -1.71
MSH6P52701 AL136116.1-201ENST00000403591 381 ntBASIC4.39□□□□□ -1.71
MSH6P52701 AC126124.2-201ENST00000413542 321 ntBASIC4.39□□□□□ -1.71
MSH6P52701 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.39□□□□□ -1.71
MSH6P52701 AC106901.1-201ENST00000425086 698 ntBASIC4.39□□□□□ -1.71
MSH6P52701 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.39□□□□□ -1.71
MSH6P52701 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.39□□□□□ -1.71
MSH6P52701 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.39□□□□□ -1.71
MSH6P52701 TRBV12-1-201ENST00000479785 344 ntBASIC4.39□□□□□ -1.71
MSH6P52701 ACTG1P13-201ENST00000486987 1043 ntBASIC4.39□□□□□ -1.71
MSH6P52701 SNORA70.19-201ENST00000516717 90 ntBASIC4.39□□□□□ -1.71
MSH6P52701 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.39□□□□□ -1.71
MSH6P52701 AP001542.1-201ENST00000591314 200 ntBASIC4.39□□□□□ -1.71
MSH6P52701 AC231759.1-201ENST00000616455 597 ntBASIC4.39□□□□□ -1.71
MSH6P52701 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.39□□□□□ -1.71
MSH6P52701 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
MSH6P52701 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
MSH6P52701 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MSH6P52701 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
MSH6P52701 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
MSH6P52701 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH6P52701 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MSH6P52701 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MSH6P52701 AL138878.1-201ENST00000405131 347 ntBASIC4.38□□□□□ -1.71
MSH6P52701 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MSH6P52701 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.38□□□□□ -1.71
MSH6P52701 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.38□□□□□ -1.71
MSH6P52701 AC022018.1-201ENST00000430685 241 ntBASIC4.38□□□□□ -1.71
MSH6P52701 AC108734.1-201ENST00000439549 399 ntBASIC4.38□□□□□ -1.71
MSH6P52701 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.38□□□□□ -1.71
MSH6P52701 EEF1B2P7-201ENST00000451177 676 ntBASIC4.38□□□□□ -1.71
MSH6P52701 UBL5P3-201ENST00000475112 231 ntBASIC4.38□□□□□ -1.71
MSH6P52701 RN7SKP34-201ENST00000516142 244 ntBASIC4.38□□□□□ -1.71
MSH6P52701 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.38□□□□□ -1.71
MSH6P52701 AC008676.3-201ENST00000521237 435 ntBASIC4.38□□□□□ -1.71
MSH6P52701 AC122134.1-201ENST00000565664 1104 ntBASIC4.38□□□□□ -1.71
MSH6P52701 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.38□□□□□ -1.71
MSH6P52701 MTND4P10-201ENST00000446199 1363 ntBASIC4.38□□□□□ -1.71
MSH6P52701 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.38□□□□□ -1.71
MSH6P52701 AC017071.1-201ENST00000564407 2204 ntBASIC4.37□□□□□ -1.71
MSH6P52701 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.37□□□□□ -1.71
MSH6P52701 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.37□□□□□ -1.71
MSH6P52701 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
MSH6P52701 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
MSH6P52701 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MSH6P52701 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MSH6P52701 RNU6-697P-201ENST00000363348 107 ntBASIC4.37□□□□□ -1.71
MSH6P52701 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.37□□□□□ -1.71
MSH6P52701 IPMKP1-201ENST00000425988 855 ntBASIC4.37□□□□□ -1.71
MSH6P52701 AC073508.1-201ENST00000428866 656 ntBASIC4.37□□□□□ -1.71
MSH6P52701 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.37□□□□□ -1.71
MSH6P52701 AC016696.1-201ENST00000446949 318 ntBASIC4.37□□□□□ -1.71
MSH6P52701 AC126389.1-201ENST00000477436 290 ntBASIC4.37□□□□□ -1.71
MSH6P52701 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.37□□□□□ -1.71
MSH6P52701 AC091917.2-201ENST00000505002 744 ntBASIC4.37□□□□□ -1.71
MSH6P52701 AC018552.3-201ENST00000567416 561 ntBASIC4.37□□□□□ -1.71
MSH6P52701 PRELID3BP8-201ENST00000604148 295 ntBASIC4.37□□□□□ -1.71
MSH6P52701 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MSH6P52701 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
MSH6P52701 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MSH6P52701 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MSH6P52701 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
MSH6P52701 RLIMP2-201ENST00000427891 1563 ntBASIC4.36□□□□□ -1.71
MSH6P52701 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
MSH6P52701 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MSH6P52701 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
MSH6P52701 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MSH6P52701 OR1S2-201ENST00000302592 978 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms