Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 MTND2P20-201ENST00000440805 661 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.63□□□□□ -1.83
CDX1P47902 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.63□□□□□ -1.83
CDX1P47902 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.63□□□□□ -1.83
CDX1P47902 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.63□□□□□ -1.83
CDX1P47902 OFD1P3Y-201ENST00000453312 783 ntBASIC3.63□□□□□ -1.83
CDX1P47902 SNRPGP5-201ENST00000456003 220 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.63□□□□□ -1.83
CDX1P47902 SNORD11.1-201ENST00000459482 85 ntBASIC3.63□□□□□ -1.83
CDX1P47902 RPL7P22-201ENST00000466005 733 ntBASIC3.63□□□□□ -1.83
CDX1P47902 ACTG1P13-201ENST00000486987 1043 ntBASIC3.63□□□□□ -1.83
CDX1P47902 CEACAMP10-202ENST00000495431 496 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC092045.1-201ENST00000495716 1231 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AK3P4-201ENST00000504283 583 ntBASIC3.63□□□□□ -1.83
CDX1P47902 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.63□□□□□ -1.83
CDX1P47902 IGHV3-32-201ENST00000519182 355 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.63□□□□□ -1.83
CDX1P47902 AP001372.4-201ENST00000524889 472 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.63□□□□□ -1.83
CDX1P47902 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.63□□□□□ -1.83
CDX1P47902 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDX1P47902 OR4P1P-201ENST00000530808 1136 ntBASIC3.63□□□□□ -1.83
CDX1P47902 FKBP1BP1-201ENST00000553366 325 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.63□□□□□ -1.83
CDX1P47902 AC010928.3-201ENST00000587712 541 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC244505.7-201ENST00000599675 272 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC091057.2-201ENST00000602594 792 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC009220.3-201ENST00000604318 586 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC069304.2-201ENST00000605154 435 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC007349.4-201ENST00000608114 532 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.63□□□□□ -1.83
CDX1P47902 AC097478.2-201ENST00000610572 514 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC243773.3-201ENST00000613270 256 ntBASIC3.63□□□□□ -1.83
CDX1P47902 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.63□□□□□ -1.83
CDX1P47902 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.63□□□□□ -1.83
CDX1P47902 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.63□□□□□ -1.83
CDX1P47902 U3.53-201ENST00000628922 216 ntBASIC3.63□□□□□ -1.83
CDX1P47902 MIR1322-201ENST00000638013 71 ntBASIC3.63□□□□□ -1.83
CDX1P47902 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDX1P47902 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDX1P47902 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.62□□□□□ -1.83
CDX1P47902 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 MFSD8-242ENST00000641690 4199 ntBASIC3.62□□□□□ -1.83
CDX1P47902 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.62□□□□□ -1.83
CDX1P47902 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.62□□□□□ -1.83
CDX1P47902 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 MIR423-201ENST00000362201 94 ntBASIC3.62□□□□□ -1.83
CDX1P47902 Y_RNA.311-201ENST00000365068 96 ntBASIC3.62□□□□□ -1.83
CDX1P47902 MIR513B-201ENST00000385136 84 ntBASIC3.62□□□□□ -1.83
CDX1P47902 RPL31P1-201ENST00000398116 372 ntBASIC3.62□□□□□ -1.83
CDX1P47902 RN7SKP167-201ENST00000411047 285 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AL807761.1-201ENST00000417622 171 ntBASIC3.62□□□□□ -1.83
CDX1P47902 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 AC006548.1-201ENST00000427470 102 ntBASIC3.62□□□□□ -1.83
CDX1P47902 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDX1P47902 COX7BP2-201ENST00000437976 242 ntBASIC3.62□□□□□ -1.83
CDX1P47902 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.62□□□□□ -1.83
CDX1P47902 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.62□□□□□ -1.83
CDX1P47902 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.62□□□□□ -1.83
CDX1P47902 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.62□□□□□ -1.83
CDX1P47902 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.62□□□□□ -1.83
CDX1P47902 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.62□□□□□ -1.83
CDX1P47902 snoU13.1-201ENST00000459157 104 ntBASIC3.62□□□□□ -1.83
CDX1P47902 snoU13.3-201ENST00000459441 104 ntBASIC3.62□□□□□ -1.83
CDX1P47902 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDX1P47902 RN7SL354P-201ENST00000469282 294 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AC104763.1-201ENST00000475274 360 ntBASIC3.62□□□□□ -1.83
CDX1P47902 RN7SL481P-201ENST00000477764 299 ntBASIC3.62□□□□□ -1.83
CDX1P47902 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.62□□□□□ -1.83
CDX1P47902 MTCYBP17-201ENST00000503579 789 ntBASIC3.62□□□□□ -1.83
CDX1P47902 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.62□□□□□ -1.83
CDX1P47902 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.62□□□□□ -1.83
CDX1P47902 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 FABP5P12-201ENST00000515543 389 ntBASIC3.62□□□□□ -1.83
CDX1P47902 RNA5SP446-201ENST00000515955 82 ntBASIC3.62□□□□□ -1.83
CDX1P47902 RNU6-583P-201ENST00000516012 92 ntBASIC3.62□□□□□ -1.83
CDX1P47902 HIGD1AP5-201ENST00000529959 259 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDX1P47902 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 MTND1P24-201ENST00000552175 861 ntBASIC3.62□□□□□ -1.83
CDX1P47902 NBEAP1-201ENST00000554452 979 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AL512347.1-201ENST00000566420 503 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.62□□□□□ -1.83
CDX1P47902 AC079171.1-201ENST00000568788 914 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AC069061.3-201ENST00000582254 823 ntBASIC3.62□□□□□ -1.83
CDX1P47902 MIR4637-201ENST00000582405 84 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.62□□□□□ -1.83
CDX1P47902 SNRPGP15-201ENST00000600149 222 ntBASIC3.62□□□□□ -1.83
CDX1P47902 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms