Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSR1P43307 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSR1P43307 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.85□□□□□ -1.79
SSR1P43307 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSR1P43307 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.85□□□□□ -1.79
SSR1P43307 RNU6-805P-201ENST00000365643 106 ntBASIC3.85□□□□□ -1.79
SSR1P43307 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SSR1P43307 AL356057.1-202ENST00000402263 756 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AL355379.1-201ENST00000405542 640 ntBASIC3.85□□□□□ -1.79
SSR1P43307 RPL5P18-201ENST00000406671 891 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AL139247.1-201ENST00000422768 325 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.85□□□□□ -1.79
SSR1P43307 AC002075.2-201ENST00000425207 252 ntBASIC3.85□□□□□ -1.79
SSR1P43307 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.85□□□□□ -1.79
SSR1P43307 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.85□□□□□ -1.79
SSR1P43307 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.85□□□□□ -1.79
SSR1P43307 AC108729.2-201ENST00000476543 840 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.85□□□□□ -1.79
SSR1P43307 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.85□□□□□ -1.79
SSR1P43307 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
SSR1P43307 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.85□□□□□ -1.79
SSR1P43307 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.85□□□□□ -1.79
SSR1P43307 AC093853.1-201ENST00000515689 483 ntBASIC3.85□□□□□ -1.79
SSR1P43307 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSR1P43307 AP000619.3-201ENST00000535634 1127 ntBASIC3.85□□□□□ -1.79
SSR1P43307 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AC023161.2-201ENST00000551218 780 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.85□□□□□ -1.79
SSR1P43307 CYP2C60P-201ENST00000566088 139 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.85□□□□□ -1.79
SSR1P43307 AC087499.8-201ENST00000578406 226 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.85□□□□□ -1.79
SSR1P43307 MAGOH2P-202ENST00000584384 429 ntBASIC3.85□□□□□ -1.79
SSR1P43307 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSR1P43307 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.85□□□□□ -1.79
SSR1P43307 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.85□□□□□ -1.79
SSR1P43307 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSR1P43307 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSR1P43307 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSR1P43307 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSR1P43307 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.85□□□□□ -1.79
SSR1P43307 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SSR1P43307 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 AC007656.2-201ENST00000624902 4547 ntBASIC3.84□□□□□ -1.79
SSR1P43307 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 PPIAP31-201ENST00000405422 495 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AL031121.1-201ENST00000406553 254 ntBASIC3.84□□□□□ -1.79
SSR1P43307 RN7SKP156-201ENST00000410308 342 ntBASIC3.84□□□□□ -1.79
SSR1P43307 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.84□□□□□ -1.79
SSR1P43307 AC023128.2-201ENST00000420880 1223 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.84□□□□□ -1.79
SSR1P43307 OR4F13P-201ENST00000428478 931 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AC004975.1-201ENST00000428733 208 ntBASIC3.84□□□□□ -1.79
SSR1P43307 MTND4LP14-201ENST00000429447 288 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.84□□□□□ -1.79
SSR1P43307 SETP8-201ENST00000435341 628 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AL645931.1-201ENST00000439737 410 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.84□□□□□ -1.79
SSR1P43307 NECAP1P2-201ENST00000455668 727 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AC096992.1-201ENST00000459808 709 ntBASIC3.84□□□□□ -1.79
SSR1P43307 NPM1P17-201ENST00000479221 602 ntBASIC3.84□□□□□ -1.79
SSR1P43307 RPS4XP22-201ENST00000480755 780 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AC068724.1-201ENST00000487100 792 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.84□□□□□ -1.79
SSR1P43307 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.84□□□□□ -1.79
SSR1P43307 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 RN7SKP141-201ENST00000516167 338 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.84□□□□□ -1.79
SSR1P43307 AC008489.1-201ENST00000524271 483 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 AC006518.1-201ENST00000541449 943 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.84□□□□□ -1.79
SSR1P43307 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.84□□□□□ -1.79
SSR1P43307 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 AC112230.1-201ENST00000604342 547 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AL392112.1-201ENST00000605115 829 ntBASIC3.84□□□□□ -1.79
SSR1P43307 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 AC090912.3-201ENST00000609775 533 ntBASIC3.84□□□□□ -1.79
SSR1P43307 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSR1P43307 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.84□□□□□ -1.79
SSR1P43307 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.84□□□□□ -1.79
SSR1P43307 U6.107-201ENST00000637108 79 ntBASIC3.84□□□□□ -1.79
SSR1P43307 AP000553.6-201ENST00000641242 118 ntBASIC3.84□□□□□ -1.79
SSR1P43307 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SSR1P43307 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.79
SSR1P43307 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.84□□□□□ -1.8
SSR1P43307 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.84□□□□□ -1.8
SSR1P43307 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSR1P43307 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.83□□□□□ -1.8
SSR1P43307 SNORD115-48-201ENST00000364764 76 ntBASIC3.83□□□□□ -1.8
SSR1P43307 RNA5SP235-201ENST00000365411 114 ntBASIC3.83□□□□□ -1.8
SSR1P43307 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.83□□□□□ -1.8
SSR1P43307 RNU6-1293P-201ENST00000384077 107 ntBASIC3.83□□□□□ -1.8
SSR1P43307 AL138880.1-201ENST00000405824 642 ntBASIC3.83□□□□□ -1.8
SSR1P43307 RPS20P25-201ENST00000412447 352 ntBASIC3.83□□□□□ -1.8
SSR1P43307 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.83□□□□□ -1.8
SSR1P43307 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.83□□□□□ -1.8
SSR1P43307 MRPS18BP2-201ENST00000434310 759 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms