Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC005410.1-202ENST00000460347 485 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.01□□□□□ -1.61
COL3A1P02461 AC109458.1-201ENST00000508858 316 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 FABP5P6-201ENST00000510588 409 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.01□□□□□ -1.61
COL3A1P02461 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.01□□□□□ -1.61
COL3A1P02461 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL3A1P02461 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.01□□□□□ -1.61
COL3A1P02461 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.01□□□□□ -1.61
COL3A1P02461 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.01□□□□□ -1.61
COL3A1P02461 MTND4LP24-201ENST00000572277 291 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.01□□□□□ -1.61
COL3A1P02461 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.01□□□□□ -1.61
COL3A1P02461 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.01□□□□□ -1.61
COL3A1P02461 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.01□□□□□ -1.61
COL3A1P02461 AP001981.2-201ENST00000603241 418 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.01□□□□□ -1.61
COL3A1P02461 AC122133.1-201ENST00000613964 233 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 CR392039.5-201ENST00000623201 510 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 AC079248.2-201ENST00000623779 326 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.01□□□□□ -1.61
COL3A1P02461 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COL3A1P02461 BX005019.1-201ENST00000561881 1810 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL3A1P02461 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL3A1P02461 MTND5P24-201ENST00000438892 1767 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL3A1P02461 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL3A1P02461 AC111188.2-201ENST00000529697 1387 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 AC008432.1-201ENST00000615912 1320 ntBASIC5.01□□□□□ -1.61
COL3A1P02461 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL3A1P02461 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL3A1P02461 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL3A1P02461 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.01□□□□□ -1.61
COL3A1P02461 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
COL3A1P02461 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL3A1P02461 Y_RNA.6-201ENST00000362350 114 ntBASIC5□□□□□ -1.61
COL3A1P02461 SNORA63.1-201ENST00000362493 131 ntBASIC5□□□□□ -1.61
COL3A1P02461 Y_RNA.333-201ENST00000365274 102 ntBASIC5□□□□□ -1.61
COL3A1P02461 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL3A1P02461 AL603865.2-201ENST00000401679 213 ntBASIC5□□□□□ -1.61
COL3A1P02461 TATDN1P1-201ENST00000414123 891 ntBASIC5□□□□□ -1.61
COL3A1P02461 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5□□□□□ -1.61
COL3A1P02461 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL3A1P02461 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 EEF1A1P39-201ENST00000440791 250 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5□□□□□ -1.61
COL3A1P02461 RPS6P2-201ENST00000454208 705 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC006511.1-201ENST00000470614 315 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5□□□□□ -1.61
COL3A1P02461 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5□□□□□ -1.61
COL3A1P02461 AC021733.2-201ENST00000518830 497 ntBASIC5□□□□□ -1.61
COL3A1P02461 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5□□□□□ -1.61
COL3A1P02461 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5□□□□□ -1.61
COL3A1P02461 AC083760.1-201ENST00000589621 670 ntBASIC5□□□□□ -1.61
COL3A1P02461 BNIP3P11-201ENST00000603878 563 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC024060.1-201ENST00000607052 494 ntBASIC5□□□□□ -1.61
COL3A1P02461 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 AC068137.3-201ENST00000639191 341 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC073869.6-201ENST00000640656 341 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC119674.1-207ENST00000641355 633 ntBASIC5□□□□□ -1.61
COL3A1P02461 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
COL3A1P02461 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 AC092104.1-201ENST00000497346 1441 ntBASIC5□□□□□ -1.61
COL3A1P02461 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL3A1P02461 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COL3A1P02461 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL3A1P02461 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COL3A1P02461 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL3A1P02461 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5□□□□□ -1.61
COL3A1P02461 RNU6-481P-201ENST00000384194 107 ntBASIC5□□□□□ -1.61
COL3A1P02461 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL3A1P02461 SNORA3.3-201ENST00000408712 125 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC011233.1-201ENST00000422812 283 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC129850.1-201ENST00000436203 508 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5□□□□□ -1.61
COL3A1P02461 MTND5P2-201ENST00000442927 1142 ntBASIC5□□□□□ -1.61
COL3A1P02461 RPL23AP23-201ENST00000452590 471 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5□□□□□ -1.61
COL3A1P02461 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL3A1P02461 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5□□□□□ -1.61
COL3A1P02461 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5□□□□□ -1.61
COL3A1P02461 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL3A1P02461 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5□□□□□ -1.61
COL3A1P02461 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5□□□□□ -1.61
COL3A1P02461 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5□□□□□ -1.61
COL3A1P02461 AC004923.2-201ENST00000529649 369 ntBASIC5□□□□□ -1.61
COL3A1P02461 AC008011.1-201ENST00000545989 227 ntBASIC5□□□□□ -1.61
COL3A1P02461 NOP56P3-201ENST00000549457 385 ntBASIC5□□□□□ -1.61
COL3A1P02461 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5□□□□□ -1.61
COL3A1P02461 AC090695.1-201ENST00000561269 1222 ntBASIC5□□□□□ -1.61
COL3A1P02461 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5□□□□□ -1.61
COL3A1P02461 SULT1C2P2-201ENST00000562517 294 ntBASIC5□□□□□ -1.61
COL3A1P02461 MIR4298-201ENST00000584380 73 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms