Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb2S4R1M3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
H2afb2S4R1M3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Gm27389-201ENSMUST00000183622 195 ntBASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Gm29707-201ENSMUST00000196325 491 ntBASIC16.45■□□□□ 0.22
H2afb2S4R1M3 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
H2afb2S4R1M3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb2S4R1M3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.44■□□□□ 0.22
H2afb2S4R1M3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
H2afb2S4R1M3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms