Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm12896-201ENSMUST00000118430 226 ntBASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.98□□□□□ -0.17
Cx3cr1Q9Z0D9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm37292-201ENSMUST00000192062 758 ntBASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cr1Q9Z0D9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm18284-201ENSMUST00000172604 624 ntBASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm27000-201ENSMUST00000182943 842 ntBASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cr1Q9Z0D9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cx3cr1Q9Z0D9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Cx3cr1Q9Z0D9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cx3cr1Q9Z0D9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cr1Q9Z0D9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms