Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.83□□□□□ -0.36
CcsQ9WU84 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.83□□□□□ -0.36
CcsQ9WU84 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.83□□□□□ -0.36
CcsQ9WU84 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.83□□□□□ -0.36
CcsQ9WU84 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CcsQ9WU84 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CcsQ9WU84 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CcsQ9WU84 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Gm27275-201ENSMUST00000184318 272 ntBASIC12.82□□□□□ -0.36
CcsQ9WU84 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CcsQ9WU84 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CcsQ9WU84 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.82□□□□□ -0.36
CcsQ9WU84 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcsQ9WU84 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Gm2399-201ENSMUST00000104944 225 ntBASIC12.81□□□□□ -0.36
CcsQ9WU84 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.81□□□□□ -0.36
CcsQ9WU84 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CcsQ9WU84 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CcsQ9WU84 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CcsQ9WU84 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.8□□□□□ -0.36
CcsQ9WU84 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CcsQ9WU84 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CcsQ9WU84 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CcsQ9WU84 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CcsQ9WU84 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CcsQ9WU84 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CcsQ9WU84 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CcsQ9WU84 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms