Protein–RNA interactions for Protein: Q9JJI8

Rpl38, 60S ribosomal protein L38, mousemouse

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl38Q9JJI8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpl38Q9JJI8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rpl38Q9JJI8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpl38Q9JJI8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpl38Q9JJI8 Dancr-204ENSMUST00000132389 2347 ntBASIC15.9■□□□□ 0.14
Rpl38Q9JJI8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpl38Q9JJI8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpl38Q9JJI8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.89■□□□□ 0.13
Rpl38Q9JJI8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpl38Q9JJI8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Gm10812-201ENSMUST00000099864 546 ntBASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.87■□□□□ 0.13
Rpl38Q9JJI8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Mir5122-201ENSMUST00000175004 89 ntBASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Gm27463-201ENSMUST00000183569 57 ntBASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Gm21814-202ENSMUST00000203277 873 ntBASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rpl38Q9JJI8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms