Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
U2af1Q9D883 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.61■■□□□ 1.05
U2af1Q9D883 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
U2af1Q9D883 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.61■■□□□ 1.05
U2af1Q9D883 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
U2af1Q9D883 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
U2af1Q9D883 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.61■■□□□ 1.05
U2af1Q9D883 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
U2af1Q9D883 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.61■■□□□ 1.05
U2af1Q9D883 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.61■■□□□ 1.05
U2af1Q9D883 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
U2af1Q9D883 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
U2af1Q9D883 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
U2af1Q9D883 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
U2af1Q9D883 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
U2af1Q9D883 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
U2af1Q9D883 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
U2af1Q9D883 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
U2af1Q9D883 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
U2af1Q9D883 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
U2af1Q9D883 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
U2af1Q9D883 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.6■■□□□ 1.05
U2af1Q9D883 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
U2af1Q9D883 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
U2af1Q9D883 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
U2af1Q9D883 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.6■■□□□ 1.05
U2af1Q9D883 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
U2af1Q9D883 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
U2af1Q9D883 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.6■■□□□ 1.05
U2af1Q9D883 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
U2af1Q9D883 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
U2af1Q9D883 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
U2af1Q9D883 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.59■■□□□ 1.05
U2af1Q9D883 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
U2af1Q9D883 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
U2af1Q9D883 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
U2af1Q9D883 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
U2af1Q9D883 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
U2af1Q9D883 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
U2af1Q9D883 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
U2af1Q9D883 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
U2af1Q9D883 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
U2af1Q9D883 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
U2af1Q9D883 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
U2af1Q9D883 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
U2af1Q9D883 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
U2af1Q9D883 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
U2af1Q9D883 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.58■■□□□ 1.05
U2af1Q9D883 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.58■■□□□ 1.05
U2af1Q9D883 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
U2af1Q9D883 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
U2af1Q9D883 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
U2af1Q9D883 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.58■■□□□ 1.05
U2af1Q9D883 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
U2af1Q9D883 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
U2af1Q9D883 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
U2af1Q9D883 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
U2af1Q9D883 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.57■■□□□ 1.04
U2af1Q9D883 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.57■■□□□ 1.04
U2af1Q9D883 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.57■■□□□ 1.04
U2af1Q9D883 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
U2af1Q9D883 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.57■■□□□ 1.04
U2af1Q9D883 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
U2af1Q9D883 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
U2af1Q9D883 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
U2af1Q9D883 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
U2af1Q9D883 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.56■■□□□ 1.04
U2af1Q9D883 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.56■■□□□ 1.04
U2af1Q9D883 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
U2af1Q9D883 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
U2af1Q9D883 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.55■■□□□ 1.04
U2af1Q9D883 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
U2af1Q9D883 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
U2af1Q9D883 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
U2af1Q9D883 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
U2af1Q9D883 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
U2af1Q9D883 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
U2af1Q9D883 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms