Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Mir6349-201ENSMUST00000184059 97 ntBASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Gm9194-201ENSMUST00000220749 1447 ntBASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Gm12382-201ENSMUST00000122005 922 ntBASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Gm37055-201ENSMUST00000191866 133 ntBASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Gm18025-201ENSMUST00000221733 862 ntBASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Gm37166-201ENSMUST00000195473 2474 ntBASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Mrpl55Q9CZ83 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Gm43183-201ENSMUST00000200632 547 ntBASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Gm45560-201ENSMUST00000211492 1472 ntBASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Mrpl55Q9CZ83 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Mrpl55Q9CZ83 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms