Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smc3Q9CW03 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smc3Q9CW03 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.37■□□□□ 0.69
Smc3Q9CW03 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc3Q9CW03 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc3Q9CW03 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.35■□□□□ 0.69
Smc3Q9CW03 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc3Q9CW03 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc3Q9CW03 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.33■□□□□ 0.69
Smc3Q9CW03 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Smc3Q9CW03 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc3Q9CW03 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smc3Q9CW03 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Smc3Q9CW03 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc3Q9CW03 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc3Q9CW03 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smc3Q9CW03 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Gm21814-202ENSMUST00000203277 873 ntBASIC19.33■□□□□ 0.68
Smc3Q9CW03 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc3Q9CW03 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.32■□□□□ 0.68
Smc3Q9CW03 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.32■□□□□ 0.68
Smc3Q9CW03 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc3Q9CW03 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc3Q9CW03 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms