Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm7Q9CQQ8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Rprl3-201ENSMUST00000157400 290 ntBASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm7Q9CQQ8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm7Q9CQQ8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Gm12895-201ENSMUST00000122214 226 ntBASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm7Q9CQQ8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm7Q9CQQ8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm7Q9CQQ8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Lsm7Q9CQQ8 Gm13312-201ENSMUST00000119631 718 ntBASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm7Q9CQQ8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Gm24589-201ENSMUST00000116692 94 ntBASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms