Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Col25a1Q99MQ5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Col25a1Q99MQ5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col25a1Q99MQ5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Col25a1Q99MQ5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Gm12428-201ENSMUST00000119844 727 ntBASIC17■□□□□ 0.31
Col25a1Q99MQ5 Gm13823-201ENSMUST00000119930 345 ntBASIC17■□□□□ 0.31
Col25a1Q99MQ5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17■□□□□ 0.31
Col25a1Q99MQ5 AC084391.1-201ENSMUST00000200651 141 ntBASIC17■□□□□ 0.31
Col25a1Q99MQ5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col25a1Q99MQ5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col25a1Q99MQ5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col25a1Q99MQ5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms