Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cstf1Q99LC2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Gm15173-201ENSMUST00000122049 433 ntBASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Gm14822-201ENSMUST00000122247 291 ntBASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cstf1Q99LC2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Gm14494-201ENSMUST00000118786 435 ntBASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cstf1Q99LC2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cstf1Q99LC2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cstf1Q99LC2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cstf1Q99LC2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cstf1Q99LC2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms