Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cdk9Q99J95 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk9Q99J95 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdk9Q99J95 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdk9Q99J95 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdk9Q99J95 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdk9Q99J95 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Gm20760-201ENSMUST00000179197 648 ntBASIC16.6■□□□□ 0.25
Cdk9Q99J95 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.6■□□□□ 0.25
Cdk9Q99J95 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdk9Q99J95 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdk9Q99J95 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms