Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdha3Q91Y16 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Dancr-204ENSMUST00000132389 2347 ntBASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha3Q91Y16 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdha3Q91Y16 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdha3Q91Y16 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Gm13186-201ENSMUST00000118031 316 ntBASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha3Q91Y16 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Gm18115-201ENSMUST00000221209 621 ntBASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha3Q91Y16 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha3Q91Y16 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms