Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TraipQ8VIG6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.46■□□□□ 0.39
TraipQ8VIG6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TraipQ8VIG6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TraipQ8VIG6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
TraipQ8VIG6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.45■□□□□ 0.38
TraipQ8VIG6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.45■□□□□ 0.38
TraipQ8VIG6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.45■□□□□ 0.38
TraipQ8VIG6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.45■□□□□ 0.38
TraipQ8VIG6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TraipQ8VIG6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TraipQ8VIG6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.44■□□□□ 0.38
TraipQ8VIG6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TraipQ8VIG6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TraipQ8VIG6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Gm6296-201ENSMUST00000222599 943 ntBASIC17.43■□□□□ 0.38
TraipQ8VIG6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TraipQ8VIG6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TraipQ8VIG6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.42■□□□□ 0.38
TraipQ8VIG6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Gm7862-201ENSMUST00000121461 292 ntBASIC17.42■□□□□ 0.38
TraipQ8VIG6 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.42■□□□□ 0.38
TraipQ8VIG6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms