Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Gm10653-202ENSMUST00000139570 835 ntBASIC17.04■□□□□ 0.32
Trim60Q8VI40 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim60Q8VI40 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim60Q8VI40 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Actl10-202ENSMUST00000226583 1501 ntBASIC17.02■□□□□ 0.32
Trim60Q8VI40 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Gm27463-201ENSMUST00000183569 57 ntBASIC17.02■□□□□ 0.32
Trim60Q8VI40 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.02■□□□□ 0.32
Trim60Q8VI40 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim60Q8VI40 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim60Q8VI40 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim60Q8VI40 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim60Q8VI40 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim60Q8VI40 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim60Q8VI40 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim60Q8VI40 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim60Q8VI40 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Trim60Q8VI40 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Trim60Q8VI40 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim60Q8VI40 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Gm8520-201ENSMUST00000186517 868 ntBASIC17.01■□□□□ 0.31
Trim60Q8VI40 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.01■□□□□ 0.31
Trim60Q8VI40 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim60Q8VI40 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17■□□□□ 0.31
Trim60Q8VI40 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim60Q8VI40 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim60Q8VI40 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Gfra2-202ENSMUST00000227633 1480 ntBASIC17■□□□□ 0.31
Trim60Q8VI40 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim60Q8VI40 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Gm3375-201ENSMUST00000203929 796 ntBASIC17■□□□□ 0.31
Trim60Q8VI40 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Otx2os1-204ENSMUST00000227221 751 ntBASIC17■□□□□ 0.31
Trim60Q8VI40 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim60Q8VI40 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17■□□□□ 0.31
Trim60Q8VI40 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17■□□□□ 0.31
Trim60Q8VI40 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim60Q8VI40 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim60Q8VI40 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms