Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm11950-201ENSMUST00000121615 838 ntBASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Retreg1dQ8VE91 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg1dQ8VE91 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg1dQ8VE91 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg1dQ8VE91 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retreg1dQ8VE91 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Retreg1dQ8VE91 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg1dQ8VE91 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms