Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf8Q8VC56 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rnf8Q8VC56 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf8Q8VC56 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf8Q8VC56 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf8Q8VC56 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms