Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.8■□□□□ 0.6
Trim29Q8R2Q0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim29Q8R2Q0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Gm11336-201ENSMUST00000118168 334 ntBASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim29Q8R2Q0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Gm44450-201ENSMUST00000199528 114 ntBASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Gm18101-201ENSMUST00000215769 548 ntBASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim29Q8R2Q0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim29Q8R2Q0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim29Q8R2Q0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim29Q8R2Q0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim29Q8R2Q0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trim29Q8R2Q0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Gm22697-201ENSMUST00000175194 63 ntBASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim29Q8R2Q0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms