Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Gm5864-201ENSMUST00000202263 970 ntBASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1aQ8CIG0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Gm13216-201ENSMUST00000117145 591 ntBASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Gm13884-201ENSMUST00000118103 829 ntBASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Gm28659-201ENSMUST00000188013 759 ntBASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1aQ8CIG0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Mir8098-201ENSMUST00000184011 137 ntBASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Depdc1aQ8CIG0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Depdc1aQ8CIG0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Depdc1aQ8CIG0 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.46■□□□□ 0.54
Depdc1aQ8CIG0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Depdc1aQ8CIG0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Gm25745-201ENSMUST00000174945 133 ntBASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.44■□□□□ 0.54
Depdc1aQ8CIG0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms