Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Calcoco1Q8CGU1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Calcoco1Q8CGU1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Gm12382-201ENSMUST00000122005 922 ntBASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Gm37292-201ENSMUST00000192062 758 ntBASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.18■□□□□ 0.34
Calcoco1Q8CGU1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Calcoco1Q8CGU1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Gm715-201ENSMUST00000117865 831 ntBASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Mir6982-201ENSMUST00000184354 68 ntBASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Calcoco1Q8CGU1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.15■□□□□ 0.34
Calcoco1Q8CGU1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms