Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Gm20049-201ENSMUST00000219950 730 ntBASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam228aQ8CDW1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Fam228aQ8CDW1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam228aQ8CDW1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fam228aQ8CDW1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.29■□□□□ 0.36
Fam228aQ8CDW1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Gm7638-201ENSMUST00000121348 967 ntBASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Gm18958-201ENSMUST00000174258 762 ntBASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fam228aQ8CDW1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms