Protein–RNA interactions for Protein: Q8CA09

Gm4894, Predicted gene 4894, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4894Q8CA09 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm4894Q8CA09 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Mir1199-201ENSMUST00000117015 119 ntBASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm4894Q8CA09 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gm4894Q8CA09 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
Gm4894Q8CA09 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Gm4894Q8CA09 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Gm4894Q8CA09 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Gm4894Q8CA09 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm4894Q8CA09 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Gm20760-201ENSMUST00000179197 648 ntBASIC13.13□□□□□ -0.31
Gm4894Q8CA09 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.13□□□□□ -0.31
Gm4894Q8CA09 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.13□□□□□ -0.31
Gm4894Q8CA09 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm4894Q8CA09 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm4894Q8CA09 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm4894Q8CA09 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Gm4894Q8CA09 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm4894Q8CA09 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms