Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx42Q810A7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx42Q810A7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx42Q810A7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx42Q810A7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.74■□□□□ 0.27
Ddx42Q810A7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Gm43183-201ENSMUST00000200632 547 ntBASIC16.74■□□□□ 0.27
Ddx42Q810A7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.74■□□□□ 0.27
Ddx42Q810A7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx42Q810A7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ddx42Q810A7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Gm18025-201ENSMUST00000221733 862 ntBASIC16.73■□□□□ 0.27
Ddx42Q810A7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.73■□□□□ 0.27
Ddx42Q810A7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.73■□□□□ 0.27
Ddx42Q810A7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx42Q810A7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Gm12382-201ENSMUST00000122005 922 ntBASIC16.72■□□□□ 0.27
Ddx42Q810A7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Gm30025-201ENSMUST00000218555 728 ntBASIC16.72■□□□□ 0.27
Ddx42Q810A7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Timm23-208ENSMUST00000226683 750 ntBASIC16.72■□□□□ 0.27
Ddx42Q810A7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx42Q810A7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx42Q810A7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Odf3b-204ENSMUST00000227834 930 ntBASIC16.71■□□□□ 0.27
Ddx42Q810A7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx42Q810A7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms