Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Gm20049-201ENSMUST00000219950 730 ntBASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upk3bQ80YF6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Il3ra-202ENSMUST00000223589 738 ntBASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upk3bQ80YF6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Upk3bQ80YF6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk3bQ80YF6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms