Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Mir5131-201ENSMUST00000175426 93 ntBASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf40bQ80W14 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf40bQ80W14 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.92■□□□□ 0.62
Prpf40bQ80W14 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Gm7063-201ENSMUST00000186840 981 ntBASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Gm6376-201ENSMUST00000209407 580 ntBASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf40bQ80W14 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Prpf40bQ80W14 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Gm7862-201ENSMUST00000121461 292 ntBASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf40bQ80W14 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf40bQ80W14 Haglr-201ENSMUST00000100000 2085 ntBASIC18.89■□□□□ 0.62
Prpf40bQ80W14 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf40bQ80W14 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prpf40bQ80W14 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Prpf40bQ80W14 Gm27702-201ENSMUST00000184512 56 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms