Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.98■□□□□ 0.47
Ush1gQ80T11 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ush1gQ80T11 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ush1gQ80T11 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.98■□□□□ 0.47
Ush1gQ80T11 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Gm25925-201ENSMUST00000158314 306 ntBASIC17.97■□□□□ 0.47
Ush1gQ80T11 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1gQ80T11 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ush1gQ80T11 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1gQ80T11 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ush1gQ80T11 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ush1gQ80T11 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.95■□□□□ 0.46
Ush1gQ80T11 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.95■□□□□ 0.46
Ush1gQ80T11 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.95■□□□□ 0.46
Ush1gQ80T11 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.95■□□□□ 0.46
Ush1gQ80T11 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1gQ80T11 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.94■□□□□ 0.46
Ush1gQ80T11 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Gm29707-201ENSMUST00000196325 491 ntBASIC17.94■□□□□ 0.46
Ush1gQ80T11 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.94■□□□□ 0.46
Ush1gQ80T11 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1gQ80T11 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.93■□□□□ 0.46
Ush1gQ80T11 Gm44450-201ENSMUST00000199528 114 ntBASIC17.93■□□□□ 0.46
Ush1gQ80T11 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ush1gQ80T11 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.93■□□□□ 0.46
Ush1gQ80T11 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1gQ80T11 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.93■□□□□ 0.46
Ush1gQ80T11 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms