Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3d21Q7TSG5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3d21Q7TSG5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Gm11336-201ENSMUST00000118168 334 ntBASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Gm10231-201ENSMUST00000181584 441 ntBASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Gm10175-202ENSMUST00000208752 441 ntBASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Gm21559-201ENSMUST00000220638 855 ntBASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Gm8587-201ENSMUST00000076538 843 ntBASIC18■□□□□ 0.47
Sh3d21Q7TSG5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Sh3d21Q7TSG5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Gm18032-201ENSMUST00000222541 538 ntBASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sh3d21Q7TSG5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sh3d21Q7TSG5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d21Q7TSG5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d21Q7TSG5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d21Q7TSG5 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.98■□□□□ 0.47
Sh3d21Q7TSG5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d21Q7TSG5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d21Q7TSG5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3d21Q7TSG5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms