Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smim12Q78RX3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.84□□□□□ -0.19
Smim12Q78RX3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smim12Q78RX3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smim12Q78RX3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smim12Q78RX3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.83□□□□□ -0.19
Smim12Q78RX3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smim12Q78RX3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smim12Q78RX3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smim12Q78RX3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Gm13186-201ENSMUST00000118031 316 ntBASIC13.83□□□□□ -0.2
Smim12Q78RX3 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.83□□□□□ -0.2
Smim12Q78RX3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Gm18115-201ENSMUST00000221209 621 ntBASIC13.83□□□□□ -0.2
Smim12Q78RX3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smim12Q78RX3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smim12Q78RX3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smim12Q78RX3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smim12Q78RX3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smim12Q78RX3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms