Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Rif1Q6PR54 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.83□□□□□ -0.2
Rif1Q6PR54 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.82□□□□□ -0.2
Rif1Q6PR54 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Mir1247-201ENSMUST00000116706 82 ntBASIC13.82□□□□□ -0.2
Rif1Q6PR54 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rif1Q6PR54 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.81□□□□□ -0.2
Rif1Q6PR54 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.81□□□□□ -0.2
Rif1Q6PR54 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rif1Q6PR54 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.8□□□□□ -0.2
Rif1Q6PR54 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rif1Q6PR54 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rif1Q6PR54 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.79□□□□□ -0.2
Rif1Q6PR54 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Mir6990-201ENSMUST00000183724 91 ntBASIC13.79□□□□□ -0.2
Rif1Q6PR54 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Gm45612-201ENSMUST00000211320 160 ntBASIC13.79□□□□□ -0.2
Rif1Q6PR54 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rif1Q6PR54 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms