Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Gm27437-201ENSMUST00000183429 107 ntBASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cachd1Q6PDJ1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cachd1Q6PDJ1 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.58■□□□□ 0.25
Cachd1Q6PDJ1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Gm11336-201ENSMUST00000118168 334 ntBASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cachd1Q6PDJ1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cachd1Q6PDJ1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Gm5312-201ENSMUST00000203728 547 ntBASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.56■□□□□ 0.24
Cachd1Q6PDJ1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.55■□□□□ 0.24
Cachd1Q6PDJ1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cachd1Q6PDJ1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cachd1Q6PDJ1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cachd1Q6PDJ1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms