Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Il3ra-202ENSMUST00000223589 738 ntBASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd3Q6P9Z1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcd3Q6P9Z1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Gm18958-201ENSMUST00000174258 762 ntBASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Gm8520-201ENSMUST00000186517 868 ntBASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcd3Q6P9Z1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcd3Q6P9Z1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcd3Q6P9Z1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms