Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn1Q64347 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.76■□□□□ 0.91
Clcn1Q64347 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Clcn1Q64347 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn1Q64347 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.76■□□□□ 0.91
Clcn1Q64347 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn1Q64347 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn1Q64347 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn1Q64347 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn1Q64347 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn1Q64347 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.75■□□□□ 0.91
Clcn1Q64347 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
Clcn1Q64347 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.75■□□□□ 0.91
Clcn1Q64347 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.75■□□□□ 0.91
Clcn1Q64347 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn1Q64347 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clcn1Q64347 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.74■□□□□ 0.91
Clcn1Q64347 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Clcn1Q64347 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.74■□□□□ 0.91
Clcn1Q64347 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Clcn1Q64347 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.74■□□□□ 0.91
Clcn1Q64347 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn1Q64347 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn1Q64347 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn1Q64347 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.73■□□□□ 0.91
Clcn1Q64347 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn1Q64347 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Clcn1Q64347 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.73■□□□□ 0.91
Clcn1Q64347 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.73■□□□□ 0.91
Clcn1Q64347 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn1Q64347 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn1Q64347 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn1Q64347 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.73■□□□□ 0.91
Clcn1Q64347 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Clcn1Q64347 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn1Q64347 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Clcn1Q64347 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.72■□□□□ 0.91
Clcn1Q64347 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.72■□□□□ 0.91
Clcn1Q64347 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Clcn1Q64347 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn1Q64347 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Clcn1Q64347 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.71■□□□□ 0.91
Clcn1Q64347 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.71■□□□□ 0.91
Clcn1Q64347 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.71■□□□□ 0.91
Clcn1Q64347 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clcn1Q64347 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clcn1Q64347 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn1Q64347 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Clcn1Q64347 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.91
Clcn1Q64347 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn1Q64347 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Clcn1Q64347 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms