Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.98□□□□□ -0.49
Ndufa4Q62425 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Gm4974-201ENSMUST00000209974 875 ntBASIC11.98□□□□□ -0.49
Ndufa4Q62425 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Ndufa4Q62425 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndufa4Q62425 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndufa4Q62425 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufa4Q62425 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufa4Q62425 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ndufa4Q62425 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.96□□□□□ -0.5
Ndufa4Q62425 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufa4Q62425 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufa4Q62425 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndufa4Q62425 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.95□□□□□ -0.5
Ndufa4Q62425 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.95□□□□□ -0.5
Ndufa4Q62425 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.95□□□□□ -0.5
Ndufa4Q62425 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ndufa4Q62425 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.95□□□□□ -0.5
Ndufa4Q62425 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndufa4Q62425 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms