Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Clcn4Q61418 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Clcn4Q61418 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.18■□□□□ 0.02
Clcn4Q61418 Gm11539-201ENSMUST00000119837 557 ntBASIC15.18■□□□□ 0.02
Clcn4Q61418 Gm13436-201ENSMUST00000120418 567 ntBASIC15.18■□□□□ 0.02
Clcn4Q61418 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.18■□□□□ 0.02
Clcn4Q61418 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.18■□□□□ 0.02
Clcn4Q61418 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Clcn4Q61418 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.18■□□□□ 0.02
Clcn4Q61418 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Clcn4Q61418 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Clcn4Q61418 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clcn4Q61418 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Clcn4Q61418 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Clcn4Q61418 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Clcn4Q61418 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Clcn4Q61418 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Gm7638-201ENSMUST00000121348 967 ntBASIC15.17■□□□□ 0.02
Clcn4Q61418 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.17■□□□□ 0.02
Clcn4Q61418 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Clcn4Q61418 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Clcn4Q61418 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clcn4Q61418 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Gm27463-201ENSMUST00000183569 57 ntBASIC15.16■□□□□ 0.02
Clcn4Q61418 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.16■□□□□ 0.02
Clcn4Q61418 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Clcn4Q61418 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Clcn4Q61418 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcn4Q61418 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.15■□□□□ 0.02
Clcn4Q61418 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Clcn4Q61418 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Clcn4Q61418 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcn4Q61418 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Clcn4Q61418 Gm7889-201ENSMUST00000185591 958 ntBASIC15.15■□□□□ 0.02
Clcn4Q61418 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.15■□□□□ 0.02
Clcn4Q61418 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.15■□□□□ 0.02
Clcn4Q61418 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms