Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clns1aQ61189 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Clns1aQ61189 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.14□□□□□ -0.15
Clns1aQ61189 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.14□□□□□ -0.15
Clns1aQ61189 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.13□□□□□ -0.15
Clns1aQ61189 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clns1aQ61189 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Clns1aQ61189 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Clns1aQ61189 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.13□□□□□ -0.15
Clns1aQ61189 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.13□□□□□ -0.15
Clns1aQ61189 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.13□□□□□ -0.15
Clns1aQ61189 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clns1aQ61189 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clns1aQ61189 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Clns1aQ61189 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Clns1aQ61189 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clns1aQ61189 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clns1aQ61189 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.11□□□□□ -0.15
Clns1aQ61189 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.11□□□□□ -0.15
Clns1aQ61189 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.11□□□□□ -0.15
Clns1aQ61189 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.11□□□□□ -0.15
Clns1aQ61189 Gm42642-201ENSMUST00000200683 355 ntBASIC14.11□□□□□ -0.15
Clns1aQ61189 Gm10138-203ENSMUST00000206952 366 ntBASIC14.11□□□□□ -0.15
Clns1aQ61189 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.11□□□□□ -0.15
Clns1aQ61189 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.11□□□□□ -0.15
Clns1aQ61189 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.11□□□□□ -0.15
Clns1aQ61189 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clns1aQ61189 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clns1aQ61189 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clns1aQ61189 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms