Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm24841-201ENSMUST00000158676 357 ntBASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mir5133-201ENSMUST00000174955 77 ntBASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm37025-201ENSMUST00000195159 829 ntBASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dio3-201ENSMUST00000097228 1449 ntBASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm10849-201ENSMUST00000100397 618 ntBASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms