Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Gm11764-201ENSMUST00000120221 623 ntBASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Fam196aQ3USH1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Fam196aQ3USH1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.45■□□□□ 0.22
Fam196aQ3USH1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Fam196aQ3USH1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Fam196aQ3USH1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam196aQ3USH1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fam196aQ3USH1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Fam196aQ3USH1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fam196aQ3USH1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fam196aQ3USH1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fam196aQ3USH1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Fam196aQ3USH1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms