Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim63Q38HM4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.66□□□□□ -0.22
Trim63Q38HM4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim63Q38HM4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim63Q38HM4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim63Q38HM4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trim63Q38HM4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Gm11175-201ENSMUST00000116172 543 ntBASIC13.63□□□□□ -0.23
Trim63Q38HM4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.63□□□□□ -0.23
Trim63Q38HM4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim63Q38HM4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.62□□□□□ -0.23
Trim63Q38HM4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Phf7-203ENSMUST00000226565 1971 ntBASIC13.62□□□□□ -0.23
Trim63Q38HM4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms