Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.67■□□□□ 0.58
GabpaQ00422 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GabpaQ00422 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.67■□□□□ 0.58
GabpaQ00422 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GabpaQ00422 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GabpaQ00422 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.66■□□□□ 0.58
GabpaQ00422 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.66■□□□□ 0.58
GabpaQ00422 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
GabpaQ00422 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GabpaQ00422 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GabpaQ00422 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.65■□□□□ 0.58
GabpaQ00422 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.65■□□□□ 0.58
GabpaQ00422 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GabpaQ00422 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.65■□□□□ 0.58
GabpaQ00422 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GabpaQ00422 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GabpaQ00422 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GabpaQ00422 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.65■□□□□ 0.58
GabpaQ00422 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GabpaQ00422 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GabpaQ00422 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.64■□□□□ 0.58
GabpaQ00422 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
GabpaQ00422 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 Gm36967-201ENSMUST00000193814 266 ntBASIC18.64■□□□□ 0.57
GabpaQ00422 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.64■□□□□ 0.57
GabpaQ00422 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.64■□□□□ 0.57
GabpaQ00422 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GabpaQ00422 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GabpaQ00422 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GabpaQ00422 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GabpaQ00422 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GabpaQ00422 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
GabpaQ00422 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GabpaQ00422 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GabpaQ00422 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GabpaQ00422 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.63■□□□□ 0.57
GabpaQ00422 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GabpaQ00422 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.63■□□□□ 0.57
GabpaQ00422 AW822252-206ENSMUST00000208904 237 ntBASIC18.63■□□□□ 0.57
GabpaQ00422 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GabpaQ00422 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GabpaQ00422 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GabpaQ00422 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GabpaQ00422 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
GabpaQ00422 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GabpaQ00422 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GabpaQ00422 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GabpaQ00422 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GabpaQ00422 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GabpaQ00422 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GabpaQ00422 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GabpaQ00422 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GabpaQ00422 Gm7862-201ENSMUST00000121461 292 ntBASIC18.62■□□□□ 0.57
GabpaQ00422 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.62■□□□□ 0.57
GabpaQ00422 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.62■□□□□ 0.57
GabpaQ00422 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GabpaQ00422 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.62■□□□□ 0.57
GabpaQ00422 Gm18195-201ENSMUST00000207604 706 ntBASIC18.62■□□□□ 0.57
GabpaQ00422 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms