Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm29518-201ENSMUST00000190858 372 ntBASIC14.7□□□□□ -0.06
SgcbP82349 Gm33142-201ENSMUST00000193913 867 ntBASIC14.7□□□□□ -0.06
SgcbP82349 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.7□□□□□ -0.06
SgcbP82349 Gm18421-201ENSMUST00000204122 625 ntBASIC14.7□□□□□ -0.06
SgcbP82349 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.7□□□□□ -0.06
SgcbP82349 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SgcbP82349 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.7□□□□□ -0.06
SgcbP82349 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SgcbP82349 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.69□□□□□ -0.06
SgcbP82349 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SgcbP82349 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
SgcbP82349 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Gm11950-201ENSMUST00000121615 838 ntBASIC14.69□□□□□ -0.06
SgcbP82349 Gm44450-201ENSMUST00000199528 114 ntBASIC14.69□□□□□ -0.06
SgcbP82349 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SgcbP82349 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.69□□□□□ -0.06
SgcbP82349 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.69□□□□□ -0.06
SgcbP82349 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.69□□□□□ -0.06
SgcbP82349 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SgcbP82349 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SgcbP82349 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SgcbP82349 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SgcbP82349 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SgcbP82349 Gm29707-201ENSMUST00000196325 491 ntBASIC14.68□□□□□ -0.06
SgcbP82349 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SgcbP82349 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.68□□□□□ -0.06
SgcbP82349 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.68□□□□□ -0.06
SgcbP82349 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SgcbP82349 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SgcbP82349 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SgcbP82349 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.67□□□□□ -0.06
SgcbP82349 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.67□□□□□ -0.06
SgcbP82349 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.67□□□□□ -0.06
SgcbP82349 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SgcbP82349 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SgcbP82349 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SgcbP82349 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SgcbP82349 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SgcbP82349 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.66□□□□□ -0.06
SgcbP82349 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.66□□□□□ -0.06
SgcbP82349 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SgcbP82349 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SgcbP82349 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms