Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1bP61025 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1bP61025 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1bP61025 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.78□□□□□ -0.52
Cks1bP61025 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1bP61025 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1bP61025 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.78□□□□□ -0.52
Cks1bP61025 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1bP61025 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.78□□□□□ -0.52
Cks1bP61025 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.78□□□□□ -0.52
Cks1bP61025 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1bP61025 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1bP61025 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Cks1bP61025 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1bP61025 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1bP61025 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1bP61025 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1bP61025 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1bP61025 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1bP61025 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1bP61025 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cks1bP61025 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.77□□□□□ -0.53
Cks1bP61025 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Cks1bP61025 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cks1bP61025 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.77□□□□□ -0.53
Cks1bP61025 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cks1bP61025 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cks1bP61025 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cks1bP61025 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cks1bP61025 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.77□□□□□ -0.53
Cks1bP61025 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.76□□□□□ -0.53
Cks1bP61025 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.76□□□□□ -0.53
Cks1bP61025 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
Cks1bP61025 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Gm10418-201ENSMUST00000100943 576 ntBASIC11.76□□□□□ -0.53
Cks1bP61025 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Cks1bP61025 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.76□□□□□ -0.53
Cks1bP61025 Gm7514-201ENSMUST00000209475 934 ntBASIC11.76□□□□□ -0.53
Cks1bP61025 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Cks1bP61025 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cks1bP61025 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cks1bP61025 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cks1bP61025 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cks1bP61025 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cks1bP61025 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.75□□□□□ -0.53
Cks1bP61025 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.75□□□□□ -0.53
Cks1bP61025 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cks1bP61025 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms