Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cpne2P59108 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne2P59108 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne2P59108 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne2P59108 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne2P59108 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.94□□□□□ -0.18
Cpne2P59108 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Gm10138-203ENSMUST00000206952 366 ntBASIC13.94□□□□□ -0.18
Cpne2P59108 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.94□□□□□ -0.18
Cpne2P59108 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cpne2P59108 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpne2P59108 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpne2P59108 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.93□□□□□ -0.18
Cpne2P59108 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.93□□□□□ -0.18
Cpne2P59108 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cpne2P59108 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Cpne2P59108 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Gm13401-201ENSMUST00000117074 291 ntBASIC13.93□□□□□ -0.18
Cpne2P59108 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.93□□□□□ -0.18
Cpne2P59108 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.93□□□□□ -0.18
Cpne2P59108 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cpne2P59108 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cpne2P59108 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cpne2P59108 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cpne2P59108 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cpne2P59108 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Cpne2P59108 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.92□□□□□ -0.18
Cpne2P59108 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cpne2P59108 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Cpne2P59108 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.91□□□□□ -0.18
Cpne2P59108 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Gm15375-201ENSMUST00000119510 849 ntBASIC13.91□□□□□ -0.18
Cpne2P59108 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.91□□□□□ -0.18
Cpne2P59108 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.91□□□□□ -0.18
Cpne2P59108 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpne2P59108 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms