Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.44□□□□□ -0.1
GdnfP48540 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.44□□□□□ -0.1
GdnfP48540 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.44□□□□□ -0.1
GdnfP48540 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.44□□□□□ -0.1
GdnfP48540 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.44□□□□□ -0.1
GdnfP48540 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
GdnfP48540 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.44□□□□□ -0.1
GdnfP48540 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GdnfP48540 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GdnfP48540 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
GdnfP48540 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
GdnfP48540 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.43□□□□□ -0.1
GdnfP48540 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.43□□□□□ -0.1
GdnfP48540 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
GdnfP48540 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GdnfP48540 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GdnfP48540 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
GdnfP48540 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GdnfP48540 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.42□□□□□ -0.1
GdnfP48540 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
GdnfP48540 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.42□□□□□ -0.1
GdnfP48540 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.42□□□□□ -0.1
GdnfP48540 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.42□□□□□ -0.1
GdnfP48540 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.42□□□□□ -0.1
GdnfP48540 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.42□□□□□ -0.1
GdnfP48540 Gm4974-201ENSMUST00000209974 875 ntBASIC14.42□□□□□ -0.1
GdnfP48540 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
GdnfP48540 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
GdnfP48540 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
GdnfP48540 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GdnfP48540 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GdnfP48540 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.41□□□□□ -0.1
GdnfP48540 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.41□□□□□ -0.1
GdnfP48540 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
GdnfP48540 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GdnfP48540 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
GdnfP48540 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
GdnfP48540 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GdnfP48540 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms