Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Sox5P35710 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox5P35710 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Gm13186-201ENSMUST00000118031 316 ntBASIC17.98■□□□□ 0.47
Sox5P35710 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.98■□□□□ 0.47
Sox5P35710 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.98■□□□□ 0.47
Sox5P35710 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox5P35710 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox5P35710 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sox5P35710 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox5P35710 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox5P35710 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sox5P35710 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Sox5P35710 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sox5P35710 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.97■□□□□ 0.47
Sox5P35710 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Sox5P35710 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sox5P35710 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Gm3375-201ENSMUST00000203929 796 ntBASIC17.97■□□□□ 0.47
Sox5P35710 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.97■□□□□ 0.47
Sox5P35710 Odf3b-204ENSMUST00000227834 930 ntBASIC17.97■□□□□ 0.47
Sox5P35710 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.97■□□□□ 0.47
Sox5P35710 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.97■□□□□ 0.47
Sox5P35710 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sox5P35710 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox5P35710 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
Sox5P35710 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Sox5P35710 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.96■□□□□ 0.47
Sox5P35710 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox5P35710 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sox5P35710 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sox5P35710 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Sox5P35710 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Phf7-203ENSMUST00000226565 1971 ntBASIC17.95■□□□□ 0.46
Sox5P35710 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Gm20760-201ENSMUST00000179197 648 ntBASIC17.95■□□□□ 0.46
Sox5P35710 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.95■□□□□ 0.46
Sox5P35710 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.95■□□□□ 0.46
Sox5P35710 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sox5P35710 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sox5P35710 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox5P35710 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.94■□□□□ 0.46
Sox5P35710 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Sox5P35710 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.94■□□□□ 0.46
Sox5P35710 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms