Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thbs1P35441 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thbs1P35441 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thbs1P35441 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thbs1P35441 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Thbs1P35441 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thbs1P35441 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thbs1P35441 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.22■□□□□ 0.03
Thbs1P35441 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.21■□□□□ 0.03
Thbs1P35441 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.21■□□□□ 0.03
Thbs1P35441 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.21■□□□□ 0.03
Thbs1P35441 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Gm42790-201ENSMUST00000201268 969 ntBASIC15.21■□□□□ 0.03
Thbs1P35441 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thbs1P35441 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.21■□□□□ 0.03
Thbs1P35441 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.21■□□□□ 0.03
Thbs1P35441 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Thbs1P35441 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Thbs1P35441 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.21■□□□□ 0.02
Thbs1P35441 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.2■□□□□ 0.02
Thbs1P35441 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.2■□□□□ 0.02
Thbs1P35441 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.2■□□□□ 0.02
Thbs1P35441 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.2■□□□□ 0.02
Thbs1P35441 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thbs1P35441 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Thbs1P35441 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.19■□□□□ 0.02
Thbs1P35441 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.19■□□□□ 0.02
Thbs1P35441 Gm18421-201ENSMUST00000204122 625 ntBASIC15.19■□□□□ 0.02
Thbs1P35441 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.19■□□□□ 0.02
Thbs1P35441 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Thbs1P35441 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Thbs1P35441 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Thbs1P35441 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.18■□□□□ 0.02
Thbs1P35441 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.18■□□□□ 0.02
Thbs1P35441 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Thbs1P35441 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Mir5130-201ENSMUST00000175160 84 ntBASIC15.18■□□□□ 0.02
Thbs1P35441 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.18■□□□□ 0.02
Thbs1P35441 Gm29707-201ENSMUST00000196325 491 ntBASIC15.18■□□□□ 0.02
Thbs1P35441 Gm45058-201ENSMUST00000205810 766 ntBASIC15.18■□□□□ 0.02
Thbs1P35441 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Gm10566-201ENSMUST00000086739 996 ntBASIC15.18■□□□□ 0.02
Thbs1P35441 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Thbs1P35441 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms