Protein–RNA interactions for Protein: P29452

Casp1, Caspase-1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp1P29452 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Casp1P29452 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Gm7862-201ENSMUST00000121461 292 ntBASIC19.74■□□□□ 0.75
Casp1P29452 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.74■□□□□ 0.75
Casp1P29452 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Gm2651-201ENSMUST00000203560 838 ntBASIC19.74■□□□□ 0.75
Casp1P29452 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Casp1P29452 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Casp1P29452 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Casp1P29452 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Casp1P29452 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.73■□□□□ 0.75
Casp1P29452 Gm7506-201ENSMUST00000207758 815 ntBASIC19.73■□□□□ 0.75
Casp1P29452 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Casp1P29452 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Casp1P29452 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Casp1P29452 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Casp1P29452 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.72■□□□□ 0.75
Casp1P29452 Mir5131-201ENSMUST00000175426 93 ntBASIC19.72■□□□□ 0.75
Casp1P29452 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.72■□□□□ 0.75
Casp1P29452 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.72■□□□□ 0.75
Casp1P29452 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.72■□□□□ 0.75
Casp1P29452 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.72■□□□□ 0.75
Casp1P29452 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Casp1P29452 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Casp1P29452 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.71■□□□□ 0.75
Casp1P29452 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Casp1P29452 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.71■□□□□ 0.75
Casp1P29452 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp1P29452 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Casp1P29452 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Casp1P29452 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Casp1P29452 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Casp1P29452 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.7■□□□□ 0.74
Casp1P29452 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.7■□□□□ 0.74
Casp1P29452 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.7■□□□□ 0.74
Casp1P29452 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp1P29452 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.7■□□□□ 0.74
Casp1P29452 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.7■□□□□ 0.74
Casp1P29452 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.69■□□□□ 0.74
Casp1P29452 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.69■□□□□ 0.74
Casp1P29452 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms